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@scifio

SCIFIO

SCientific Image Format Input & Output: a flexible, extensible framework for image I/O
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  1. scifio scifio Public

    SCientific Image Format Input & Output: a flexible, extensible framework for image I/O. *EXPERIMENTAL* All API is subject to change, so depend at your own risk! See also @openmicroscopy/bioformats.

    Java 101 43

  2. scifio-cli scifio-cli Public

    SCIFIO command line tools

    Java 3 3

  3. scifio.github.io scifio.github.io Public

    SCIFIO web site

    HTML 1 3

  4. scifio-bf-compat scifio-bf-compat Public

    SCIFIO (@scifio/scifio) plug-in allowing use of Bio-Formats readers.

    Java 3 5

  5. scifio-imageio scifio-imageio Public

    SCIFIO ImageIO plugin for ITK

    C++ 16 14

  6. scifio-itk-bridge scifio-itk-bridge Public

    Java code which pipes information between SCIFIO and ITK.

    Java 3 3

Repositories

Showing 10 of 21 repositories
  • scifio-tutorials Public

    Tutorials for use of SCIFIO and its plugins.

    scifio/scifio-tutorials's past year of commit activity
    Java 3 CC0-1.0 4 4 1 Updated Oct 24, 2026
  • scifio-testing Public

    Extensible test suite for SCIFIO and SCIFIO-based software.

    scifio/scifio-testing's past year of commit activity
    0 2 0 0 Updated Oct 24, 2026
  • scifio-ome-xml Public

    SCIFIO plug-in providing support for the OME data model, including readers, writers and translators for OME-XML and OME-TIFF formats.

    scifio/scifio-ome-xml's past year of commit activity
    Java 2 BSD-2-Clause 3 10 1 Updated Oct 24, 2026
  • scifio-lifesci Public

    SCIFIO plug-in providing support for proprietary life science formats (e.g. those supported by Bio-Formats).

    scifio/scifio-lifesci's past year of commit activity
    Java 1 GPL-2.0 4 3 1 Updated Oct 24, 2026
  • scifio-labeling Public

    I/O for ImgLib2 ImgLabelings

    scifio/scifio-labeling's past year of commit activity
    Java 2 BSD-2-Clause 1 3 0 Updated Oct 24, 2026
  • scifio-javacv Public

    JavaCV bindings for SCIFIO so it can read all those movies

    scifio/scifio-javacv's past year of commit activity
    Java 2 4 2 1 Updated Oct 24, 2026
  • scifio-jai-imageio Public

    SCIFIO fork of the Java Advanced Imaging Image I/O Tools API Core

    scifio/scifio-jai-imageio's past year of commit activity
    Java 2 2 1 0 Updated Oct 24, 2026
  • scifio-itk-bridge Public

    Java code which pipes information between SCIFIO and ITK.

    scifio/scifio-itk-bridge's past year of commit activity
    Java 3 3 5 0 Updated Oct 24, 2026
  • scifio-hdf5 Public

    SCIFIO format plugins for reading and writing HDF5 data.

    scifio/scifio-hdf5's past year of commit activity
    Java 0 BSD-2-Clause 4 1 1 Updated Oct 24, 2026
  • scifio-cli Public

    SCIFIO command line tools

    scifio/scifio-cli's past year of commit activity
    Java 3 BSD-2-Clause 3 1 0 Updated Oct 24, 2026
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